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Commit 3abe99a2

commit 3abe99a2685f4a169f791d12352041c70daf2b05
Author: Coder Agent <coder@agents.omni>
Date:   Tue Feb 17 10:52:06 2026

    Pipeline: native pi spawning, fix stale worktree detection
    
    Switch dev agent spawning from agentd (Docker containers) to native
    pi process. This enables buffet providers (claude-code, codex) that
    don't work inside containers.
    
    Key changes:
    - Dev.hs: spawn pi directly with --provider flag, track via PID files
      and .exit marker files for async status polling
    - Workspace.hs: filter out state.db-wal/shm files from stale worktree
      scan, check entries are actual directories
    
    Tested end-to-end: pipeline spawns pi agent, agent edits file, runs
    typecheck/bild, commits with Task-Id trailer. Verify and integrate
    phases also exercised.
    
    Task-Id: t-603

diff --git a/Omni/Pipeline/Dev.hs b/Omni/Pipeline/Dev.hs
index 75e3720f..aa32615e 100644
--- a/Omni/Pipeline/Dev.hs
+++ b/Omni/Pipeline/Dev.hs
@@ -3,9 +3,8 @@
 
 -- | Dev phase: agent spawning and prompt building.
 --
--- The only phase that uses an LLM agent. Builds a simplified prompt
--- (agent just writes code, pipeline owns status transitions) and
--- manages the agent lifecycle via agentd.
+-- Uses `pi` directly on the host (supports claude-code/codex buffet providers).
+-- Tracks agent processes via PID files for async status polling.
 module Omni.Pipeline.Dev where
 
 import Alpha
@@ -18,8 +17,8 @@ import qualified Omni.Pipeline.Git as Git
 import qualified Omni.Task.Core as Task
 import qualified System.Directory as Dir
 import qualified System.Exit as Exit
+import qualified System.IO as IO
 import qualified System.Process as Process
-import qualified Text.Read as Read
 
 -- | Build the dev prompt. Pure function — easy to test.
 buildDevPrompt :: Text -> Task.Task -> Int -> Maybe Text -> Text
@@ -70,7 +69,9 @@ buildDevPrompt baseBranch task patchset maybeReviewFeedback =
             ""
           ]
 
--- | Spawn a dev agent via agentd. Returns an ActiveDev record.
+-- | Spawn a dev agent via `pi` (native host, supports buffet providers).
+-- Writes prompt to file, spawns pi in background, records PID.
+-- Returns ActiveDev for async polling.
 spawnDev ::
   Core.PipelineConfig ->
   FilePath ->
@@ -90,63 +91,123 @@ spawnDev cfg workspace task patchset maybeReviewFeedback dbRowId = do
   let prompt = buildDevPrompt baseBranch task patchset maybeReviewFeedback
   now <- getCurrentTime
   let runId = "dev-" <> T.unpack taskId <> "-" <> show (floor (utcTimeToPOSIXSeconds now) :: Integer)
-      promptDir = workspace <> "/_/tmp/pipeline"
-      promptFile = promptDir <> "/" <> runId <> ".md"
-  Dir.createDirectoryIfMissing True promptDir
+      pipelineDir = workspace <> "/_/tmp/pipeline"
+      promptFile = pipelineDir <> "/" <> runId <> ".md"
+      logFile = pipelineDir <> "/" <> runId <> ".log"
+      pidFile = pipelineDir <> "/" <> runId <> ".pid"
+      exitFile = pipelineDir <> "/" <> runId <> ".exit"
+  Dir.createDirectoryIfMissing True pipelineDir
   TIO.writeFile promptFile prompt
 
-  -- Build agentd command
-  let args =
-        ["run", promptFile, "-n", runId, "--timeout", show (Core.pcAgentTimeout cfg), "--max-iter", show (Core.pcAgentMaxIter cfg), "--max-cost", show (Core.pcAgentMaxCost cfg)]
-          ++ maybe [] (\p -> ["-p", T.unpack p]) (Core.pcAgentProvider cfg)
-
-  -- Spawn in background (don't use --fg)
-  (exitCode, _out, err) <-
-    Process.readCreateProcessWithExitCode
-      (Process.proc "agentd" args) {Process.cwd = Just workspace}
-      ""
-
-  case exitCode of
-    Exit.ExitSuccess ->
-      pure
-        <| Right
-          Core.ActiveDev
-            { Core.adTaskId = taskId,
-              Core.adRunId = T.pack runId,
-              Core.adWorkspace = workspace,
-              Core.adStartedAt = now,
-              Core.adBeforeSha = beforeSha,
-              Core.adPatchset = patchset,
-              Core.adNamespace = Task.taskNamespace task,
-              Core.adRunDbId = dbRowId
-            }
-    Exit.ExitFailure _ ->
-      pure (Left ("agentd spawn failed: " <> T.pack err))
+  -- Build pi command (prompt path must be relative to workspace CWD)
+  let provider = fromMaybe "claude-code" (Core.pcAgentProvider cfg)
+      relPromptFile = "_/tmp/pipeline/" <> runId <> ".md"
+      piArgs =
+        [ "--provider",
+          T.unpack provider,
+          "--no-session",
+          "-p",
+          "@" <> relPromptFile
+        ]
+
+  -- Open log file for immediate writing
+  logHandle <- IO.openFile logFile IO.WriteMode
+  IO.hSetBuffering logHandle IO.LineBuffering
+
+  -- Spawn pi directly with stdout/stderr to log file
+  let cp =
+        (Process.proc "pi" piArgs)
+          { Process.cwd = Just workspace,
+            Process.std_in = Process.NoStream,
+            Process.std_out = Process.UseHandle logHandle,
+            Process.std_err = Process.UseHandle logHandle,
+            Process.create_group = True
+          }
+
+  spawnResult <- try (Process.createProcess cp)
+  case spawnResult of
+    Left (e :: SomeException) -> do
+      IO.hClose logHandle
+      pure (Left ("pi spawn failed: " <> T.pack (show e)))
+    Right (_, _, _, ph) -> do
+      -- Record PID for status polling
+      mPid <- Process.getPid ph
+      case mPid of
+        Just pid -> writeFile pidFile (show pid)
+        Nothing -> pure ()
+
+      -- Fork a thread to wait for pi to finish and record exit code
+      _ <-
+        forkIO <| do
+          exitCode <- Process.waitForProcess ph
+          IO.hClose logHandle
+          let code = case exitCode of
+                Exit.ExitSuccess -> "0"
+                Exit.ExitFailure n -> show n
+          writeFile exitFile code
+
+      -- Give pi a moment to start (check for immediate failure)
+      threadDelay 500_000 -- 500ms
+      maybeExit <- Process.getProcessExitCode ph
+      case maybeExit of
+        Just (Exit.ExitFailure code) -> do
+          threadDelay 200_000 -- let log flush
+          errOutput <- safeReadFile logFile
+          pure
+            ( Left
+                ( "pi exited immediately (code "
+                    <> T.pack (show code)
+                    <> "): "
+                    <> T.take 500 errOutput
+                )
+            )
+        _ ->
+          pure
+            <| Right
+              Core.ActiveDev
+                { Core.adTaskId = taskId,
+                  Core.adRunId = T.pack runId,
+                  Core.adWorkspace = workspace,
+                  Core.adStartedAt = now,
+                  Core.adBeforeSha = beforeSha,
+                  Core.adPatchset = patchset,
+                  Core.adNamespace = Task.taskNamespace task,
+                  Core.adRunDbId = dbRowId
+                }
 
 -- | Check the status of a running dev agent.
+-- Checks the .exit file (written by wrapper script on completion).
 checkDevStatus :: Core.ActiveDev -> IO Core.DevResult
 checkDevStatus ad = do
-  -- Poll agentd status
-  (exitCode, out, _err) <-
-    Process.readProcessWithExitCode
-      "agentd"
-      ["status", T.unpack (Core.adRunId ad), "--json"]
-      ""
-  case exitCode of
-    Exit.ExitFailure _ ->
-      -- Can't determine status — treat as still running
-      -- (agentd might not have started yet)
-      pure Core.StillRunning
-    Exit.ExitSuccess -> do
-      let agentStatus = extractField "status" out
-      case agentStatus of
-        Just "running" -> pure Core.StillRunning
-        Just "completed" -> checkForCommit ad
-        Just "failed" ->
-          pure (Core.DevFailed (T.pack (fromMaybe "Agent run failed" (extractField "error" out))))
-        Just "timeout" ->
-          pure (Core.DevFailed "Agent run timed out")
-        _ -> pure Core.StillRunning
+  let pipelineDir = Core.adWorkspace ad <> "/_/tmp/pipeline"
+      exitFile = pipelineDir <> "/" <> T.unpack (Core.adRunId ad) <> ".exit"
+      pidFile = pipelineDir <> "/" <> T.unpack (Core.adRunId ad) <> ".pid"
+      logFile = pipelineDir <> "/" <> T.unpack (Core.adRunId ad) <> ".log"
+
+  -- Check if agent has exited (wrapper script writes .exit file)
+  exitExists <- Dir.doesFileExist exitFile
+  if exitExists
+    then do
+      exitStr <- T.strip </ safeReadFile exitFile
+      if exitStr == "0"
+        then checkForCommit ad
+        else do
+          logTail <- T.takeEnd 1000 </ safeReadFile logFile
+          pure (Core.DevFailed ("Agent exited with code " <> exitStr <> ":\n" <> logTail))
+    else do
+      -- Check if process is still alive
+      pidExists <- Dir.doesFileExist pidFile
+      if pidExists
+        then do
+          pidStr <- T.strip </ safeReadFile pidFile
+          alive <- isProcessAlive pidStr
+          if alive
+            then pure Core.StillRunning
+            else -- Process died without .exit file — check for commits anyway
+              checkForCommit ad
+        else
+          -- No PID file yet — still starting
+          pure Core.StillRunning
 
 -- | After agent completes, check if a new commit was produced.
 checkForCommit :: Core.ActiveDev -> IO Core.DevResult
@@ -158,23 +219,38 @@ checkForCommit ad = do
       | before == Just after -> pure (Core.DevFailed "Agent completed but made no commit")
       | otherwise -> pure (Core.DevSuccess (Just after))
 
--- | Get the cost of an agentd run.
+-- | Check if a process with the given PID is alive.
+isProcessAlive :: Text -> IO Bool
+isProcessAlive pidText = do
+  let pidStr = T.unpack pidText
+  (exitCode, _, _) <- Process.readProcessWithExitCode "kill" ["-0", pidStr] ""
+  pure (exitCode == Exit.ExitSuccess)
+
+-- | Safely read a file, returning empty text if it doesn't exist.
+safeReadFile :: FilePath -> IO Text
+safeReadFile path = do
+  exists <- Dir.doesFileExist path
+  if exists
+    then do
+      h <- IO.openFile path IO.ReadMode
+      IO.hSetEncoding h IO.utf8
+      content <- TIO.hGetContents h
+      content `seq` IO.hClose h
+      pure content
+    else pure ""
+
+-- | Get the cost of a run (native mode doesn't track per-run cost).
 getRunCost :: Text -> IO Double
-getRunCost runId = do
-  (exitCode, out, _) <-
-    Process.readProcessWithExitCode
-      "agentd"
-      ["status", T.unpack runId, "--json"]
-      ""
-  case exitCode of
-    Exit.ExitSuccess ->
-      case extractField "cost_cents" out of
-        Just s -> pure (fromMaybe 0 (Read.readMaybe s))
-        Nothing -> pure 0
-    _ -> pure 0
-
--- | Simple field extraction from JSON output (avoids aeson dependency for
--- quick status checks). Looks for "field": "value" or "field": number.
+getRunCost _runId = pure 0
+
+-- | Shell-escape a string for safe interpolation.
+shellEscape :: String -> String
+shellEscape s = "'" <> concatMap esc s <> "'"
+  where
+    esc '\'' = "'\\''"
+    esc c = [c]
+
+-- | Simple field extraction from JSON output.
 extractField :: String -> String -> Maybe String
 extractField field input =
   case matchingLine of
diff --git a/Omni/Pipeline/Workspace.hs b/Omni/Pipeline/Workspace.hs
index a7abd566..cafd2197 100644
--- a/Omni/Pipeline/Workspace.hs
+++ b/Omni/Pipeline/Workspace.hs
@@ -8,6 +8,7 @@ module Omni.Pipeline.Workspace where
 
 import Alpha
 import qualified Control.Concurrent.STM as STM
+import qualified Data.List as List
 import qualified Data.Map.Strict as Map
 import qualified Data.Text as T
 import qualified Omni.Pipeline.Core as Core
@@ -133,5 +134,14 @@ findStaleWorktrees pool = do
     then pure []
     else do
       entries <- Dir.listDirectory root
-      let taskDirs = filter (\e -> e /= "integration" && e /= "state.db") entries
-      pure (map T.pack taskDirs)
+      let taskDirs =
+            filter
+              ( \e ->
+                  e
+                    /= "integration"
+                    && not ("state.db" `List.isPrefixOf` e)
+              )
+              entries
+      -- Only return entries that are actual directories (not files)
+      dirs <- filterM (\e -> Dir.doesDirectoryExist (root <> "/" <> e)) taskDirs
+      pure (map T.pack dirs)